Academy scientist Brian Fisher looks at life on a different scale than most people. And his unique perspective has had a profound influence on his approach to species conservation in some of the world’s most critically endangered biodiversity hotspots.

Fisher, an entomologist who specializes in the study of ants, was recently appointed the Academy’s first Patterson Scholar in Science and Sustainability. The honor comes in recognition of his tireless work in Madagascar and other remote regions of the world, as well as the innovative methods he uses to find and study the creatures he calls “the glue that holds ecosystems together.”

“Ants are one of the most important members of ecosystems,” says Fisher. “They turn over more soil than earthworms.” But they’re also some of the most overlooked, he says. “If they were bigger, they would be the most studied type of organism, but people don’t see them.”

Fisher does see ants of course, lots of them. He and his team have identified more than 900 new species of ants in Madagascar alone. So obviously, he spends a lot of time looking closely at patches of ground where ants might live. Some of his other methods, however, are decidedly higher-tech and provide a much more detailed view of these organisms, their habitats, and what their presence or absence might indicate about ecosystem health.

Surprisingly, one of these detailed views comes from space. Fisher has teamed up with satellite companies and engineers from Google to deliver high-resolution satellite images of some of the least explored areas of Madagascar. Fisher can reference these images in the field, even when no network access is available.

The amount of information this places at his fingertips is not unlike what we’ve come to expect from our smartphones while we’re navigating city streets. But Fisher uses these technologies as he explores some of the world’s most remote regions. It’s an unprecedented view and it’s invaluable to his research. Equipped with a GPS-enabled tablet with customized software and high-res satellite images taken only weeks prior, he can not only see where to camp and find water, but he can also tell which patches of forest are most likely to contain new species of ants.

Fisher has learned from years of field experience in Madagascar to focus his search for ants on forests that are wet, situated at 800 meters (2,600 feet) of elevation or below, and isolated from other such patches. Those are the forests that tend to have the greatest species richness—of ants and many other arthropods. They’re also the types of forest that Fisher thinks should be our highest priority in terms of habitat conservation for these species.

Some habitat conservation analyses suggest that deforestation has stabilized in Madagascar, but the percentage of deforestation is not the important measure, Fisher says. “The important question is: Where are we losing the most species due to deforestation?” he says. “What patch of forest is under threat that should be our highest conservation priority right now?”

Of course, ants shouldn’t be our only focus, according to Fisher, but the perspective that research on these types of animals provides is helping to correct a bias in habitat conservation. “If you base conservation on vertebrates alone,” he says, “it leads you to conclude that only the largest forests are important. Ants and other insects provide a better map of true biodiversity.” It’s a more holistic approach.

Based on this approach, Fisher is developing new models that are helping him provide effective conservation recommendations as well as plan future research efforts. He’s currently working with conservation organizations like the Critical Ecosystem Partnership Fund (CEPF) to identify patches of forest that should be highest priority for protection. So far, he’s identified five areas that CEPF has under review, and he’s always in search of more. “Most of the forests in the lowlands are already gone, so we’re really focused on trying to find the remaining lowland patches of great conservation value,” Fisher says.

Of course, protecting biodiversity requires a solid understanding of the species that are actually out there. This is a huge job in places as species-rich as Madagascar—even if you’re focused only on ants. Fisher and his team of 20 Malagasy scientists and students, as well as five postdocs here in San Francisco, are busy trying to identify and describe the hundreds of new species of ants they’ve discovered in Madagascar. The thinking is that the more species they document, the stronger the efforts will be to save the habitats where these organisms live.

Gathering and sharing information about ants—not to mention generating an appreciation for these creatures—was the primary motivation behind AntWeb, the online database that Fisher created. The site contains records of more than 10,000 ant species collected from around the world, and the perspective it provides on these tiny creatures is unlike most scientific databases. In addition to the tremendous amount of data that AntWeb contains about each species, Fisher says the site’s high-resolution composite images are helping to put a face on these tiny creatures and getting people to appreciate ants and their significance to the health of our planet.

And yet there are so many more ants to find and document—and Fisher and his team feel like they’re in a race against time. Their methods, he says, are “too, too slow. We’re struggling to speed it up.”

Staring at a satellite image of rugged, roadless Malagasy terrain, Fisher says there’s one piece of technology he and his team need more than any other. “We could really use a helicopter,” he says, only half joking.

He’ll continue his exploration of the unexplored when he returns to Madagascar in January 2014—by helicopter or on foot… probably on foot.

Steven Bedard is editor of the Academy website. A recent Bay Area transplant, he now understands what all the fuss is about.

Just like humans, some birds have better luck than others. From city life to dance moves to penises, the natural endowments of birds vary in so many ways! Several recent science publications demonstrate diversity in the bird world, so we thought we’d provide a sampling for you…

A study last week in the Proceedings of the Royal Society B determines that city birds keep much longer hours than their forest-dwelling brethren. Researchers studied European blackbirds (Turdus merula) in different environments in Germany and discovered that the artificial lights and noises of the city mean the blackbirds start their activities earlier in the day and keep on going later in the evening.

In fact, studies in the lab revealed that the city birds’ biological clocks were sped up compared to the forest birds’. And the authors are convinced that birds aren’t the only animals affected by city life. From the abstract:

Urban environments can significantly modify biologically important rhythms in wild organisms.

City dwellers, take note!

Australia’s superb lyrebird males possess some of the most brilliant plumage in the avian world, and researchers have now determined that the feathered creature is also a brilliant song-and-dance bird. Scientists found that the birds have a distinct dance for each of four distinct songs. Wired posted a short video of a male lyrebird strutting its stuff that you have to hear and see to believe!

This mating ritual demonstrates that “the coordination of independently produced repertoires of acoustic and movement signals is not a uniquely human trait,” according to a recent publication in Current Biology.

Maybe the male lyrebirds song-and-dance routine makes up for the fact that these males have no penises. 97% of birds simply lack the organ, using an opening called the cloaca instead. Originally, all birds had penises, but along the evolutionary path, most birds lost them. There are theories for why the organ was no longer needed (lighter for flight, more female control over mates), but the reason is still not known.

However, a new study, also in Current Biology, uncovers the mechanism behind the loss. Researchers compared embryos of the well-endowed Pekin duck (it has a corkscrew penis that can grow the entire length of its body) to those of the cloaca-ed rooster and found that both embryos begin to form penises, but around day eight or nine, the roosters’ stop growing. The scientists determined that one gene, Bmp4, caused the rooster embryo’s penis to stop growing.

Carl Zimmer, writing in the New York Times, explains why this research not only paints a bigger picture of bird evolution, but also illustrates how understanding these genetic mechanisms can help humans, too.

Superb lyrebird image: Melburnian/Wikipedia

Healthy ecosystems often rely on secret agents. Not spies, but organisms that might not seem to have an obvious connection to a natural community. We reported on this earlier in the week when we described the influence of toucans on the evolution of palm trees in the Brazilian rainforest. Now, two other recent studies make these hidden, yet important, connections more apparent.

With coral reef ecosystems around the world under threat from climate change, coral bleaching and ocean acidification, Australian researchers are looking for resourceful ways to save these communities. Reporting in Nature Communications this week, a team led by Joseph Maina from Macquarie University determined that a coral reef off the coast of Madagascar could benefit from a healthy forest on the mainland.

It’s not obvious, but the scientists discovered that improving land-use management strategies, such as controlling sediment pollution caused by deforestation and soil erosion, are crucial to reef survival.

“Curbing sediment pollution to coral reefs is one of the major recommendations to buy time for corals to survive ocean warming and bleaching events in the future,” says co-author Jens Zinke of the University of Western Australia. “Our results clearly show that land-use management is the most important policy action needed to prevent further damage and preserve the reef ecosystem.”

In another study, published last week in PLoS Biology, researchers examined the role of species in a variety of ecosystems—from coral reefs to tropical forests to alpine meadows—in terms of their abundance. David Mouillot of the University of Montpellier 2 and his colleagues found that it is primarily the rare species, rather than the more common ones, that have distinct traits involved in unique ecological functions. As biodiversity declines, these unique features are particularly vulnerable to extinction because rare species are likely to disappear first.

Biodiverse environments are characterized by many rare species. These rare species contribute to the taxonomic richness of the area, but their functional importance in ecosystems is largely unknown. It is often assumed that they fulfill the same ecological roles as those of common species but have less impact because of their low abundance, but the work of Mouillot and his team shows that, in fact, the opposite may be true.

Examples of such functional species include the giant moray (Gymnothorax javanicus), a predatory fish that hunts at night in the labyrinths of coral reefs; the pyramidal saxifrage (Saxifraga cotyledon), an alpine plant that is an important resource for pollinators; and Pouteria maxima, a huge tree in the rainforest of Guyana, which is particularly resilient to fire and drought. Not only are these species rare, but they have few functional equivalents among the more common species in their respective ecosystems.

“Our results suggest that the loss of these species could heavily impact upon the functioning of their ecosystems,” says Mouillot. “This calls into question many current conservation strategies.” The authors argue that the preservation of biodiversity as a whole—not just the most common species—appears to be crucial for the resilience of ecosystems.

Image: David Mouillot/PLoS Biology

In ecosystems, every organism plays a part. From the smallest microbe to the fiercest predator to the tallest tree, each species contributes to making its community healthy. But this role isn’t always obvious.

Take the colorful toucan and the palm tree Euterpe edulis in the Brazilian rainforest. Scientists have long understood that the palm’s seeds are dispersed by not only the large birds, but smaller birds, too. The birds eat the seeds, fly-off and poop—spreading the palm seeds far and wide.

But the past 100 years have seen many changes in the rainforest. Since the 1800s, the forest has become more and more fragmented, mostly due to agricultural development such as the planting of coffee and sugar cane. By creating this patchwork of forest and farmland, humans have affected the rainforest in many ways.

According to a new study in the journal Science, the numbers of toucans have declined in the forest patches, and the palm trees in those areas have responded by producing much smaller seeds.

These palms generally produce different-sized seeds. Different sized-birds with different-sized beaks distribute the seeds evenly. But with the toucan and other large birds, such as large cotingas, absent from the ecosystem, only the small-seeded palm trees are reproducing. The birds are basically changing the evolutionary trajectory of these trees.

Researchers, led by Mauro Galetti from the Universidade Estadual Paulista in São Paulo, Brazil, collected more than 9,000 seeds from 22 different palm populations and used a combination of statistics, genetics, and evolutionary models to determine that forest fragmentation displaced many toucans. They also considered the influence many environmental factors, such as climate, soil fertility, and forest cover, but none could account for the change in palm seed size over the years in the fragmented forests.

For palm tree seeds, size matters. “Small seeds are more vulnerable to desiccation and cannot withstand projected climate change,” explains Galetti. The rainforest is projected to be drier as the climate warms, and the smaller seeds are less equipped than larger seeds for survival in these conditions.

See, every organism plays an important part.

“Unfortunately, the effect we document in our work is probably not an isolated case,” says Galetti. “The pervasive, fast-paced extirpation of large vertebrates in their natural habitats is very likely causing unprecedented changes in the evolutionary trajectories of many tropical species.”

Image: Lindolfo Souto

According to the study, “Forest clearing and degradation account for roughly 15% of global greenhouse gas emissions, more than all the cars, trains, planes, ships, and trucks on earth.”

One item actually agreed upon at Copenhagen last December was the importance of forest conservation to reduce climate change. An initiative created called REDD—Reducing Emissions from Deforestation and Forest Degradation—calls for wealthy nations to financially support developing nations to protect their forests.

Doug Boucher of the Union of Concerned Scientists and one of the authors of the study puts it this way, “For REDD to succeed, forest nations must develop policies and institutions to reduce and eventually eliminate forest clearing and degradation.”

And the simplest way to begin this seems to be through ILPAs. The authors highlight analyses showing that since 2002, deforestation in the Brazilian Amazon has been 7 to 11 times lower inside of indigenous lands and other protected areas than elsewhere. (A great article in SFGate last fall shows how one Amazonian tribe is using Google Earth to help stop deforestation.)

The scientists from 13 institutions and universities who collaborated on the study recommend ILPAs be instrumental in governmental decisions. “Given this likely policy landscape, nations can use ILPAs to reduce emissions in two ways: first, create new ILPAs in areas facing deforestation risk now and in the foreseeable future; second, strengthen the management of existing ILPAs to reduce ongoing deforestation within and surrounding their borders.”

And the authors mention that protecting these forests will do more than reduce global warming, it can also help protect indigenous cultures and wildlife. A win-win.

Creative Commons image by leoffreitas