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	<title>Science Today &#187; salamanders</title>
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		<title>New Chytrid</title>
		<link>http://www.calacademy.org/sciencetoday/new-chytrid/5512160/</link>
		<comments>http://www.calacademy.org/sciencetoday/new-chytrid/5512160/#comments</comments>
		<pubDate>Tue, 10 Sep 2013 23:49:47 +0000</pubDate>
		<dc:creator>molly</dc:creator>
				<category><![CDATA[Academy Research]]></category>
		<category><![CDATA[Life]]></category>
		<category><![CDATA[Sustainability]]></category>
		<category><![CDATA[Top Story]]></category>
		<category><![CDATA[amphibians]]></category>
		<category><![CDATA[Bd]]></category>
		<category><![CDATA[bs]]></category>
		<category><![CDATA[chytrid]]></category>
		<category><![CDATA[dave blackburn]]></category>
		<category><![CDATA[disease]]></category>
		<category><![CDATA[extinction]]></category>
		<category><![CDATA[frogs]]></category>
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		<category><![CDATA[salamanders]]></category>

		<guid isPermaLink="false">http://www.calacademy.org/sciencetoday/?p=12160</guid>
		<description><![CDATA[When researchers found fire salamanders in the Netherlands dying at a rapid rate from a skin fungus, they thought the infection looked familiar.]]></description>
				<content:encoded><![CDATA[<p><span style="color: #888888;"><strong>By Molly Michelson</strong></span></p>
<p>When researchers found <a href="http://en.wikipedia.org/wiki/Fire_salamander">fire salamanders</a> (<i>Salamandra salamandra</i>) in the Netherlands dying at a rapid rate from a skin fungus, they thought the infection looked familiar.</p>
<p>Globally, amphibian numbers are declining in large part due to a chytrid fungus known as <a href="http://en.wikipedia.org/wiki/Batrachochytrium"><i>B</i><i>atrachochytrium dendrobatidis</i></a> or <i>Bd</i>. <i>Bd </i>attacks the skin of its host causing “the outer layers of the epidermis to thicken,” says the Academy’s amphibian expert, <a href="http://research.calacademy.org/herp/staff/dblackburn">Dave Blackburn</a>. “<i>Bd</i> disrupts the function of amphibian’s skin by interfering with electrolyte transport.”</p>
<p><i>Bd </i>is quick and deadly: its effects may have wiped out more than 200 species of amphibians worldwide.</p>
<p>Similarly, the fire salamanders are dying at a rapid rate. Since first seeing dead animals in the Netherlands in 2010, scientists have observed that the population has fallen to around 10 individuals, less than four per cent of the original numbers.</p>
<p>But the similarities end there. The infected fire salamanders display skin lesions or ulcers and when the animals were tested, they were negative for <i>Bd</i>.</p>
<p>So what gives? According to a paper published last week in the <a href="http://www.pnas.org/content/early/2013/08/28/1307356110.abstract"><i>Proceedings of the National Academy of Sciences</i></a>, a new chytrid fungus.</p>
<p><em>Batrachochytrium salamandrivorans</em> or <em>Bs</em> is closely related to <em>Bd</em>, but an entirely new chytrid fungus species.<em> </em></p>
<p>This study is incredibly important, Blackburn says. “It clearly shows three things: 1) <i>Bs</i> is a new species of chytrid, 2) it presents different pathology than <i>Bd</i> (these lesions), and 3) it may have different host specificity.”</p>
<p><i>Bs</i>, like <i>Bd</i>,<i> </i>doesn’t kill every amphibian it meets. “<a href="http://en.wikipedia.org/wiki/Midwife_toad">Midwife toad</a>s, <i>Alytes obstetricans</i>,<i> </i>are among the most susceptible of European frogs to <i>Bd</i>,” Blackburn says. But the study researchers infected the toads with new fungus <i>Bs</i>, and they were not susceptible to that fungus.</p>
<p>But the evidence the study provides only brings more questions for Blackburn. “When we think some amphibians around the world were killed by <i>Bd</i>, could it have been something else? <i>Bs</i>? Yet another species of chytrid?”</p>
<p>He gives an example of the thermal range for <i>Bs </i>and <i>Bd</i>. “People trying to predict how <i>Bd</i> spreads and where it would thrive—the fungus may be absent from that location now, but where it might flourish given the right conditions—by modeling where the disease is now with information on climatic conditions. In the past, have we been looking at the thermal range for <i>Bd </i>only or might we have confused some records of <i>Bd</i> with what we now know as <i>Bs</i>? Each may have different thermal conditions and there could be errors to where we’ve predicted that the disease could thrive.”</p>
<p>Testing for the new chytrid fungus also presents a conundrum. Although tests have been developed to screen for <i>Bd</i>, it is not clear whether these might sometimes be detecting <i>Bs </i>instead. The authors of the new study have developed primers to test for <i>Bs</i>, and Blackburn and his lab will obtain these to test animals here at the Academy.</p>
<p>Blackburn and other scientists came back with live frogs from Cameroon earlier this summer. The team hopes to raise and breed the animals here, displaying them for the public. As we reported in a <a href="http://www.calacademy.org/sciencetoday/a-trip-to-cameroon/5511888/">story</a> a few weeks ago, the frogs are part of a new initiative at the Academy focused on amphibian conservation and biodiversity education.</p>
<p>The Cameroonian frogs were screened and tested positive for <i>Bd</i>. They are being treated with a proven microbial solution, but now Blackburn is worried about <i>Bs</i>. “How widespread is <i>Bs</i>?”</p>
<p>And Blackburn has more and more questions… “Does it only affect salamanders? We’ve seen salamander declines in Central America—it looks like <i>Bd</i>, but could it be <i>Bs</i>? We found skin lesions on amphibians in Cameroon with mortality events, <i>Bd</i> was not present when tested. Could we have found <i>Bs</i>, instead?</p>
<p>“How is it spread, is it totally different from <i>Bd</i>? Why are we seeing these now? How is climate change affecting the emergence, spread, and change of prevalence? How do you stop them?</p>
<p>“<em>Bs </em>really opens the door for further research,” Blackburn says.<em> </em></p>
<p><em>Image: <a title="User:Archaeodontosaurus" href="http://commons.wikimedia.org/wiki/User:Archaeodontosaurus">Didier Descouens</a>/Wikipedia</em></p>
<img width="110" height="62" src="http://www.calacademy.org/sciencetoday/wp-content/uploads/2013/09/Salamandara_salamandra_MHNT_3-110x62.jpg" class="attachment-110x62 wp-post-image" alt="chytrid, bd, bs, dave blackburn, frogs, salamanders, amphibians, disease, extinction, fungus" />]]></content:encoded>
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		<title>Bio-Inspired Robots</title>
		<link>http://www.calacademy.org/sciencetoday/bio-inspired-robots/5510867/</link>
		<comments>http://www.calacademy.org/sciencetoday/bio-inspired-robots/5510867/#comments</comments>
		<pubDate>Wed, 08 May 2013 20:39:12 +0000</pubDate>
		<dc:creator>molly</dc:creator>
				<category><![CDATA[Life]]></category>
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		<category><![CDATA[adaptations]]></category>
		<category><![CDATA[america's cup]]></category>
		<category><![CDATA[ants]]></category>
		<category><![CDATA[bioinspiration]]></category>
		<category><![CDATA[biomimetics]]></category>
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		<category><![CDATA[built for speed]]></category>
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		<category><![CDATA[evolution]]></category>
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		<category><![CDATA[robotics]]></category>
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		<category><![CDATA[uc berkeley]]></category>

		<guid isPermaLink="false">http://www.calacademy.org/sciencetoday/?p=10867</guid>
		<description><![CDATA[These robots get their inspiration from nature.]]></description>
				<content:encoded><![CDATA[<p><span style="color: #888888;"><strong>By Molly Michelson</strong></span></p>
<p>At <i>Science Today</i>, we love stories that highlight bioinspiration—tales that reveal how close inspection of the natural world lead to problem-solving in the human realm. Engineering-wise, nature has had millions of years of trial and error to get things right, so why not learn from evolution and adaptation?</p>
<p>This week, the Academy will open <a href="http://www.calacademy.org/built-for-speed/">Built for Speed</a><i>,</i> a new exhibit that explains the adaptations by fast fish and marine mammals that make them swift and speedy underwater and how boat designers use a similar process of adaptations to create ultrafast sailboats to compete in the <a href="http://www.americascup.com/">America’s Cup</a> race.</p>
<p>To get ready for Built for Speed, we’re featuring a few recent news stories about robots inspired and refined by the study of nature. Enjoy!</p>
<p><span style="color: #888888;"><b>UC Berkeley</b></span></p>
<p>One of the leaders in bio-inspired robots is right across the Bay from the Academy. Biologists and engineers at UC Berkeley have been <a href="http://ciber.berkeley.edu/">collaborating</a> for several years on biological inspiration. And the researchers find inspiration from the most unlikely of sources. We’ve covered their <a href="http://www.calacademy.org/sciencetoday/bio-inspiration-gecko-toes/552233/">gecko-inspired bot</a>, but earlier this year news outlets featured Cal cockroach robots. Did you know that cockroaches are able to balance without using their brains? According to <a href="http://news.discovery.com/tech/robotics/cockroaches-teach-robots-to-balance-130226.htm"><i>Discovery News</i></a>, this is fabulous news for robot builders:</p>
<p style="padding-left: 30px;">… One of the recurring challenges of designing a mobile robot is writing an algorithm that keeps it from falling over.</p>
<p><a href="http://www.newscientist.com/blogs/onepercent/2013/01/cardboard-cockroach-ranks-amon.html">VELOCIRoACH</a>, is a Berkeley roach bot and happens to be one of the fastest robots in the world. <a href="http://www.newscientist.com/blogs/nstv/2013/01/fastest-turning-legged-robot-uses-tail-to-take-corners.html">TAYLRoach</a> uses its tail to make fast turns. <a href="http://www.newscientist.com/blogs/nstv/2013/01/fastest-turning-legged-robot-uses-tail-to-take-corners.html"><i>New Scientist</i></a> says that smaller is better for these robots:</p>
<p style="padding-left: 30px;">Small-legged robots are being developed for search and rescue, for situations where a location is inaccessible or too dangerous for humans.</p>
<p><span style="color: #888888;"><b>More Insect-bots</b></span></p>
<p>Berkeley isn’t the only academic biorobotic institution. Last week, Harvard scientists <a href="http://www.sciencemag.org/content/340/6132/603">published</a> their engineering breakthrough—the first flying insect-like robot. Ten to fifteen years in the making, this bug-bot was inspired by the biology of a fly. It has submillimeter-scale anatomy and two wafer-thin wings that flap almost invisibly, 120 times per second! Check out the <a href="http://www.nature.com/news/tiny-robot-flies-like-a-fly-1.12926">video</a>.</p>
<p>Do you feel like you’re being watched? Another <a href="http://www.nature.com/nature/journal/v497/n7447/full/nature12083.html">publication</a> last week describes a new camera, inspired by insect eyes. Made of 180 tiny lenses, the camera can take panoramic pictures that offer similar compound views to those of ants, bees and praying mantises. According to Ed Yong in <a href="http://phenomena.nationalgeographic.com/2013/05/02/insect-eye-digital-camera-sees-what-you-just-did/"><i>National Geographic</i></a>, this tiny biomimetic camera is “ideal for surveillance. Perhaps in the future, we’ll be watched by man-made flies on the walls.” Creepy!</p>
<p>Speaking of creepy, how about small robots that work together like a colony of ants? French and American scientists wanted to understand how individual ants, when part of a moving colony, orient themselves in the labyrinthine pathways that stretch from their nest to various food sources. They hope their robotic findings reveal “possible improvements for the design of man-made transportation networks,” according to an abstract in <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1002903"><i>PLoS Computational Biology</i></a>.</p>
<p><span style="color: #888888;"><b>Snakes and Seahorses and Birds, Oh My</b></span></p>
<p>Want more? How about a <a href="http://www.newscientist.com/article/dn23466-rubbery-robot-snake-is-a-slithering-mimic.html">soft snake robot</a> that slithers? A robotic arm as flexible and protected as a <a href="http://www.sciencedaily.com/releases/2013/05/130501132123.htm">seahorse’s tail</a>? <a href="http://discovermagazine.com/2013/march/5-airplane-wings#.UYkoDoLah7d">Airplane wings</a> fashioned after the wings of a herring gull? What about a <a href="http://www.newscientist.com/blogs/onepercent/2013/03/robot-salamander.html">swimming and crawling robot</a> as efficient as a salamander? <a href="http://www.wired.com/wiredscience/2013/05/biomimetic-robots">All of the above</a>? Help yourself—many of the links above have videos detailing the creations.</p>
<p><b><span style="color: #888888;">Speedy Virtual Robots</span> </b></p>
<p>Finally, just because it’s super cool, check out <a href="http://blogs.discovermagazine.com/d-brief/2013/04/24/watch-this-squishy-robots-evolve-for-speed/#.UYknCYLah7d">this</a> video on <a href="http://blogs.discovermagazine.com/d-brief/2013/04/24/watch-this-squishy-robots-evolve-for-speed/#.UYknCYLah7d"><i>Discover</i></a>’s site. Researchers at the University of Wyoming and Cornell created a computer program to design fast virtual robots. Each robot could be made out of four different materials, and only the fastest would “reproduce.”</p>
<p style="padding-left: 30px;">Essentially, the researchers incentivized forward motion, so the faster the robot, the more successful it would be in the evolutionary race.</p>
<p>You have to see the simulations created in this “<a href="http://blogs.discovermagazine.com/d-brief/2013/04/24/watch-this-squishy-robots-evolve-for-speed/#.UYknCYLah7d">Evolution in Action</a>.”</p>
<p><em>Image of insect-eye camera: <em>John A. Rogers, University of Illinois at Urbana-Champaign</em></em></p>
<p>&nbsp;</p>
<img width="110" height="62" src="http://www.calacademy.org/sciencetoday/wp-content/uploads/2013/05/InsectEyesCamera-110x62.jpg" class="attachment-110x62 wp-post-image" alt="insects, bioinspiration, biomimetics, UC Berkeley, geckos, cockroaches, birds, robots, robotics, salamanders, snakes, built for speed, america&#039;s cup, ants, evolution, adaptations" />]]></content:encoded>
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		<title>7,000 Kinds of Amphibians</title>
		<link>http://www.calacademy.org/sciencetoday/7000-kinds-of-amphibians/559010/</link>
		<comments>http://www.calacademy.org/sciencetoday/7000-kinds-of-amphibians/559010/#comments</comments>
		<pubDate>Mon, 22 Oct 2012 21:19:09 +0000</pubDate>
		<dc:creator>molly</dc:creator>
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		<description><![CDATA[Did you know there are 7,000 different kinds of amphibians? Learn more with this fun music video! Song by Conor Loughridge and the Wiggly Tendrils.]]></description>
				<content:encoded><![CDATA[<p>Did you know there are 7,000 different kinds of amphibians? Learn more with this fun music video! Song by Conor Loughridge and the Wiggly Tendrils.</p>
<img width="110" height="62" src="http://www.calacademy.org/sciencetoday/wp-content/uploads/2012/10/Screen-shot-2012-10-22-at-1.54.19-PM-110x62.png" class="attachment-110x62 wp-post-image" alt="Screen shot 2012-10-22 at 1.54.19 PM" />]]></content:encoded>
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